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Bioinformatics and Statistics Resources

Information and resources on bioinformatics and statistics for the UCSF research community


The Reading tab in this guide lists eBooks, blogs, Q&A sites, and other resources for those of you who want a bioinformatics refresher or just some inspiration.

Software (General Bioinformatics)

The Software (General Bioinformatics) tab focuses on listing software programs that are open source and/or free of charge for General Annotation, Alignment and Mapping, Data Manipulation, Visualization of omics data.

Software (Pathway/Enrichment)

The Software (Pathway/Enrichment) tab lists tools for functional annotation of omics data and is focused on free alternatives to Qiagen's Ingenuity Pathway Analysis software.